PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G198500.1.p
Common NamePRUPE_ppa019545mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 216aa    MW: 23818.9 Da    PI: 10.7086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G198500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.7e-114692354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        ++h+  ErrRR riN  +++Lr++lP++      K++Ka++L ++v+ +++L
  Prupe.6G198500.1.p 46 KKHSDSERRRRMRINGQYATLRTVLPNL-----IKMDKASVLAETVRQVREL 92
                        679************************9.....6************988877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-1235101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.2724392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-84692IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.12E-94697No hitNo description
Gene3DG3DSA:4.10.280.104.0E-124796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-104998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550215.95E-6133199No hitNo description
CDDcd048732.62E-6136199No hitNo description
Gene3DG3DSA:3.30.70.2601.6E-6136180No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MLSIPSYYPK QISFPKGQGV FPVNTIYSKS FFKPKSKAET KVIAAKKHSD SERRRRMRIN  60
GQYATLRTVL PNLIKMDKAS VLAETVRQVR ELKRAVAEVE AACRHGDSDE CVLPGGVDKL  120
SLEQCDGEQE GLVKATLSCG DRPGLISDMT RALSSVKGRL VRAEMVIVGG RSKNVLWIQG  180
LGDGKEGMVA LRRALKVVID RPIFAGLRKR FHLPQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007206526.11e-157hypothetical protein PRUPE_ppa019545mg
TrEMBLM5WLM71e-157M5WLM7_PRUPE; Uncharacterized protein
STRINGGLYMA02G04650.21e-63(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.14e-42bHLH family protein